PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN01286.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 194aa    MW: 21995.6 Da    PI: 7.2539
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN01286.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-18755254
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
                +y+GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aa+a+++a++ + 
  KHN01286.1  7 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAARAYDEAARLMC 55
                69******9.**********8.....334**********************8775 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.83E-34666No hitNo description
SuperFamilySSF541714.38E-21766IPR016177DNA-binding domain
SMARTSM003805.4E-41770IPR001471AP2/ERF domain
PROSITE profilePS5103221.127764IPR001471AP2/ERF domain
PfamPF008472.2E-11756IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-34764IPR001471AP2/ERF domain
PRINTSPR003673.2E-11819IPR001471AP2/ERF domain
PRINTSPR003673.2E-113046IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MARPQQRYRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPKAR  60
TNFPYNPNEP HSSSSKLLSA TLTAKLHKCH MASLSLQMAK QKPPQNKEPQ PSHGSNPFAS  120
ANAIAGSSAD TSFRWPDNRH EEFRWLEGNW VGVEGQVEVS NQQFQPVLED DHIEQMIQEL  180
LDYGSIELCP VSST
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-17868667ATERF1
3gcc_A4e-17868667ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0927830.0BT092783.1 Soybean clone JCVI-FLGm-11B8 unknown mRNA.
GenBankBT0973970.0BT097397.1 Soybean clone JCVI-FLGm-16I21 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001240879.11e-146uncharacterized protein LOC100777851
SwissprotQ94AW58e-74ERF03_ARATH; Ethylene-responsive transcription factor ERF003
TrEMBLA0A0B2NVZ31e-146A0A0B2NVZ3_GLYSO; Ethylene-responsive transcription factor ERF003
TrEMBLC6T5S01e-146C6T5S0_SOYBN; Uncharacterized protein
STRINGGLYMA07G02930.11e-145(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF110634110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.14e-52ERF family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]